Transcript: MGP_LPJ_T0031847.1

Description

CDK5 regulatory subunit associated protein 3 [Source:MGI Symbol;Acc:MGI:1933126]

Gene Synonyms

1810007E24Rik, BC002318, C53, C81486, HSF-27, IC53, LZAP, MST016, OK/SW-cl.114

Location

Chromosome 11: 99,792,685-99,805,141 reverse strand.

Reference strain equivalent

Cdk5rap3

About this transcript

This transcript has 13 exons, is annotated with 8 domains and features and maps to 240 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0018919.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0031848.1	-	2250	503aa	MGP_LPJ_P0031848	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0031851.1	-	768	145aa	MGP_LPJ_P0031851	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0031854.1	-	758	124aa	MGP_LPJ_P0031854	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0031852.1	-	566	140aa	MGP_LPJ_P0031852	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0031856.1	-	488	80aa	MGP_LPJ_P0031856	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0031847.1	-	2201	112aa	MGP_LPJ_P0031847	Nonsense mediated decay	CCDS25306	A2A6D9 A2A6E0 A2A6E1 B0QZI8 D6RII4 D6RJ46 F2Z486 Q99LM2	-
MGP_LPJ_T0031853.1	-	620	142aa	MGP_LPJ_P0031853	Nonsense mediated decay		-	-
MGP_LPJ_T0031855.1	-	617	45aa	MGP_LPJ_P0031855	Nonsense mediated decay		-	-
MGP_LPJ_T0031850.1	-	1207	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0031849.1	-	836	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0031857.1	-	820	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 13, Coding exons: 5, Transcript length: 2,201 bps, Translation length: 112 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99LM2

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS25306

Version

MGP_LPJ_T0031847.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0031847.1

Summary

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Transcript: MGP_LPJ_T0031847.1

Summary

About Us

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