Transcript: MGP_LPJ_T0028261.1

Description

cilia and flagella associated protein 36 [Source:MGI Symbol;Acc:MGI:1913994]

Gene Synonyms

2300003H10, 4931428D14Rik, Ccdc104

Location

Chromosome 11: 27,470,889-27,501,079 reverse strand.

Reference strain equivalent

Cfap36

About this transcript

This transcript has 11 exons, is annotated with 12 domains and features and maps to 191 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0018015.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0028261.1	-	1668	343aa	MGP_LPJ_P0028261	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24493	Q5SNY8 Q8C6E0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0028263.1	-	738	137aa	MGP_LPJ_P0028263	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0028262.1	-	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0028265.1	-	600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0028264.1	-	448	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,668 bps, Translation length: 343 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C6E0

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS24493

Version

MGP_LPJ_T0028261.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0028261.1

Summary

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Transcript: MGP_LPJ_T0028261.1

Summary

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