Transcript: MGP_LPJ_T0026114.1

Description

cold inducible RNA binding protein [Source:MGI Symbol;Acc:MGI:893588]

Gene Synonyms

Cirp, R74941

Location

Chromosome 10: 81,231,296-81,235,605 forward strand.

Reference strain equivalent

Cirbp

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features and maps to 136 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0017398.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0026115.1	-	1321	172aa	MGP_LPJ_P0026115	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0026116.1	-	845	168aa	MGP_LPJ_P0026116	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0026114.1	-	423	108aa	MGP_LPJ_P0026114	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35975	D3YU80 K4DI65 P60824	-
MGP_LPJ_T0026118.1	-	912	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0026119.1	-	894	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0026120.1	-	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0026117.1	-	376	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 423 bps, Translation length: 108 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P60824

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS35975

Version

MGP_LPJ_T0026114.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0026114.1

Summary

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Transcript: MGP_LPJ_T0026114.1

Summary

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