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Transcript: MGP_LPJ_T0024487.1

Description

SNF2 histone linker PHD RING helicase [Source:MGI Symbol;Acc:MGI:1917581]

Gene Synonyms

2610103K11Rik, AA450458, AU024614, BC006883, D230017O13Rik, E130018M05

Location

Chromosome 10: 8,316,017-8,354,619 forward strand.

Reference strain equivalent

Shprh

About this transcript

This transcript has 21 exons, is annotated with 2 domains and features and maps to 225 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0016928.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0024488.1-92711674aaMGP_LPJ_P0024488
 
Protein coding
-Ensembl Canonical
MGP_LPJ_T0024491.1-72251616aaMGP_LPJ_P0024491
 
Protein coding
--
MGP_LPJ_T0024490.1-66791646aaMGP_LPJ_P0024490
 
Protein coding
--
MGP_LPJ_T0024487.1-41711031aaMGP_LPJ_P0024487
 
Nonsense mediated decay
CCDS35838, CCDS35839, CCDS70003F7D4T4 Q7TPQ3 -
MGP_LPJ_T0024492.1-945218aaMGP_LPJ_P0024492
 
Nonsense mediated decay
--
MGP_LPJ_T0024493.1-3467No protein-
 
Retained intron
--
MGP_LPJ_T0024489.1-3028No protein-
 
Retained intron
--
MGP_LPJ_T0024494.1-2857No protein-
 
Retained intron
--

Summary

Statistics

Exons: 21, Coding exons: 14, Transcript length: 4,171 bps, Translation length: 1,031 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7TPQ3

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS35838, CCDS35839, CCDS70003

Version

MGP_LPJ_T0024487.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.