Transcript: MGP_LPJ_T0023515.1

Description

immunoglobulin superfamily, member 9 [Source:MGI Symbol;Acc:MGI:2135283]

Gene Synonyms

644ETD8, Dasm1, Igsf9a, Kiaa1355-hp, NRT1, Ncaml, Nrt1, mKIAA1355

Location

Chromosome 1: 179,435,813-179,443,598 forward strand.

Reference strain equivalent

Igsf9

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features and maps to 59 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0016705.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0023522.1	-	4192	1179aa	MGP_LPJ_P0023522	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0023518.1	-	4120	1179aa	MGP_LPJ_P0023518	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0023516.1	-	775	168aa	MGP_LPJ_P0023516	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0023524.1	-	636	211aa	MGP_LPJ_P0023524	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0023515.1	-	617	109aa	MGP_LPJ_P0023515	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15515	A0A0A6YXP1 D3YZD2 D3Z7T6 Q05BQ1	-
MGP_LPJ_T0023521.1	-	3951	528aa	MGP_LPJ_P0023521	Nonsense mediated decay		-	-
MGP_LPJ_T0023517.1	-	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0023520.1	-	2031	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0023527.1	-	926	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0023525.1	-	921	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0023526.1	-	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0023523.1	-	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0023519.1	-	608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0023528.1	-	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 617 bps, Translation length: 109 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q05BQ1

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS15515

Version

MGP_LPJ_T0023515.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0023515.1

Summary

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Transcript: MGP_LPJ_T0023515.1

Summary

About Us

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