Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: MGP_LPJ_T0064266.1

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Description

Rab geranylgeranyl transferase, b subunit [Source:MGI Symbol;Acc:MGI:99537]

Location

Chromosome 3: 159,203,699-159,208,711 reverse strand.

Reference strain equivalent

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features and maps to 279 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0027926.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0064268.1	-	1418	339aa	MGP_LPJ_P0064268	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0064267.1	-	1381	331aa	MGP_LPJ_P0064267	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0064266.1	-	1992	132aa	MGP_LPJ_P0064266	Nonsense mediated decay	CCDS17923, CCDS51097	A0A0G2JDK3 A0A0G2JF29 A0A0G2JFP7 A0A0G2JG79 A0A0G2JGH5 A0A0G2JGU4 P53612 Q3TVF4 Q6PFA1 Q9JIF6	-
MGP_LPJ_T0064270.1	-	1775	59aa	MGP_LPJ_P0064270	Nonsense mediated decay		-	-
MGP_LPJ_T0064269.1	-	1399	148aa	MGP_LPJ_P0064269	Nonsense mediated decay		-	-
MGP_LPJ_T0064271.1	-	1271	153aa	MGP_LPJ_P0064271	Nonsense mediated decay		-	-
MGP_LPJ_T0064274.1	-	1169	153aa	MGP_LPJ_P0064274	Nonsense mediated decay		-	-
MGP_LPJ_T0064273.1	-	1129	162aa	MGP_LPJ_P0064273	Nonsense mediated decay		-	-
MGP_LPJ_T0064272.1	-	1055	205aa	MGP_LPJ_P0064272	Nonsense mediated decay		-	-
MGP_LPJ_T0064275.1	-	654	79aa	MGP_LPJ_P0064275	Nonsense mediated decay		-	-
MGP_LPJ_T0064276.1	-	631	151aa	MGP_LPJ_P0064276	Nonsense mediated decay		-	-
MGP_LPJ_T0064277.1	-	382	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-

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Protein summary

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Protein domains for MGP_LPJ_P0064266.

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