Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Custom tracks

Transcript: MGP_LPJ_T0059098.1

Description

CD40 antigen [Source:MGI Symbol;Acc:MGI:88336]

Gene Synonyms

AI326936, Bp50, Cd40, GP39, HIGM1, IGM, IMD3, T-BAM, TRAP, Tnfrsf5, p50

Location

Reference strain equivalent

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features and maps to 43 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0059099.1	-	2986	289aa	MGP_LPJ_P0059099	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0059100.1	-	1596	260aa	MGP_LPJ_P0059100	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0059101.1	-	668	203aa	MGP_LPJ_P0059101	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0059102.1	-	370	114aa	MGP_LPJ_P0059102	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0059103.1	-	1062	234aa	MGP_LPJ_P0059103	Nonsense mediated decay		-	-
MGP_LPJ_T0059098.1	-	348	44aa	MGP_LPJ_P0059098	Nonsense mediated decay	CCDS17069, CCDS17070, CCDS17071	A2A5L7 P27512 S4R2M8	-
MGP_LPJ_T0059104.1	-	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Protein summary