Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Custom tracks

Transcript: MGP_LPJ_T0022351.1

Description

LIM homeobox protein 9 [Source:MGI Symbol;Acc:MGI:1316721]

Gene Synonyms

3110009O07Rik, BB104635, LH2B, Lhx9 alpha

Location

Reference strain equivalent

About this transcript

This transcript has 5 exons, is annotated with 26 domains and features and maps to 244 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0022354.1	-	2065	397aa	MGP_LPJ_P0022354	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0022351.1	-	4937	330aa	MGP_LPJ_P0022351	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15333, CCDS15334, CCDS35726	A0A0A6YY42 Q9WUH2	-
MGP_LPJ_T0022353.1	-	4633	321aa	MGP_LPJ_P0022353	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0022352.1	-	4551	321aa	MGP_LPJ_P0022352	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0022357.1	-	1058	75aa	MGP_LPJ_P0022357	Nonsense mediated decay		-	-
MGP_LPJ_T0022356.1	-	1927	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0022355.1	-	1316	388aa	MGP_LPJ_P0022355	Unknown likely coding		-	-

Protein summary