Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Custom tracks

Transcript: MGP_LPJ_T0019045.1

Description

collagen, type IX, alpha 1 [Source:MGI Symbol;Acc:MGI:88465]

Gene Synonyms

Col9a-1

Location

Reference strain equivalent

About this transcript

This transcript has 38 exons, is annotated with 34 domains and features and maps to 411 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0019045.1	-	3834	921aa	MGP_LPJ_P0019045	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35527, CCDS69871	G3X995 Q9D0D2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0019046.1	-	3059	680aa	MGP_LPJ_P0019046	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0019047.1	-	898	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0019048.1	-	806	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-

Protein summary