Transcript: MGP_FVBNJ_T0093209.1

Description

procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:MGI Symbol;Acc:MGI:1347007]

Gene Synonyms

D530025C14Rik, LH2, Plod-2, lysyl hydroxylase 2

Location

Chromosome 9: 88,831,869-88,896,040 forward strand.

Reference strain equivalent

Plod2

About this transcript

This transcript has 19 exons, is annotated with 13 domains and features and maps to 287 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0034892.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0093210.1	-	3659	758aa	MGP_FVBNJ_P0093210	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0093209.1	-	3645	737aa	MGP_FVBNJ_P0093209	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23408, CCDS52887	E9Q718 Q9R0B9	-
MGP_FVBNJ_T0093214.1	-	1276	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0093212.1	-	844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0093213.1	-	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0093211.1	-	2433	810aa	MGP_FVBNJ_P0093211	Unknown likely coding		-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,645 bps, Translation length: 737 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9R0B9

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS23408, CCDS52887

Version

MGP_FVBNJ_T0093209.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0093209.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_FVBNJ_T0093209.1

Summary

About Us

Get help

Our sister sites

Follow us