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Transcript: MGP_FVBNJ_T0093101.1

Description

synaptotagmin binding, cytoplasmic RNA interacting protein [Source:MGI Symbol;Acc:MGI:1891690]

Gene Synonyms

2610109K23Rik, 4632417O19Rik, GRY-RBP, Hnrpq, Nsap1, Nsap1l, RRM RNA binding protein GRY-RBP, hnRNP Q, pp68

Location

Chromosome 9: 84,783,209-84,820,345 reverse strand.

Reference strain equivalent

Syncrip

About this transcript

This transcript has 12 exons, is annotated with 35 domains and features and maps to 544 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0034864.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0093107.1-2391623aaMGP_FVBNJ_P0093107
 
Protein coding
-Ensembl Canonical
MGP_FVBNJ_T0093101.1-9453562aaMGP_FVBNJ_P0093101
 
Protein coding
CCDS23388, CCDS57686, CCDS72292, CCDS81048A0A0R4J259 G3UWM1 G3UXJ6
G3UXU5 G3UZ48 G3UZI2
G3V018 G3XA76 Q7TMK9
-
MGP_FVBNJ_T0093104.1-3404561aaMGP_FVBNJ_P0093104
 
Protein coding
--
MGP_FVBNJ_T0093103.1-3286527aaMGP_FVBNJ_P0093103
 
Protein coding
--
MGP_FVBNJ_T0093102.1-3173448aaMGP_FVBNJ_P0093102
 
Protein coding
--
MGP_FVBNJ_T0093106.1-1767588aaMGP_FVBNJ_P0093106
 
Protein coding
--
MGP_FVBNJ_T0093109.1-766196aaMGP_FVBNJ_P0093109
 
Protein coding
--
MGP_FVBNJ_T0093111.1-47394aaMGP_FVBNJ_P0093111
 
Protein coding
--
MGP_FVBNJ_T0093105.1-192567aaMGP_FVBNJ_P0093105
 
Nonsense mediated decay
--
MGP_FVBNJ_T0093110.1-2384No protein-
 
Retained intron
--
MGP_FVBNJ_T0093108.1-549No protein-
 
Retained intron
--

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 9,453 bps, Translation length: 562 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7TMK9

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS23388, CCDS57686, CCDS72292, CCDS81048

Version

MGP_FVBNJ_T0093101.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.