Transcript: MGP_FVBNJ_T0088226.1

Description

CCR4-NOT transcription complex, subunit 7 [Source:MGI Symbol;Acc:MGI:1298230]

Gene Synonyms

AU022737, CAF-1, Caf1, Pop2

Location

Chromosome 8: 37,226,514-37,236,439 reverse strand.

Reference strain equivalent

Cnot7

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature and maps to 207 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0033317.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0088231.1	-	2981	285aa	MGP_FVBNJ_P0088231	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0088227.1	-	2616	285aa	MGP_FVBNJ_P0088227	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0088228.1	-	2542	285aa	MGP_FVBNJ_P0088228	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0088230.1	-	2462	248aa	MGP_FVBNJ_P0088230	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0088236.1	-	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0088232.1	-	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0088237.1	-	483	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0088238.1	-	406	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0088235.1	-	312	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0088229.1	-	3813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0088233.1	-	840	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0088226.1	-	2062	179aa	MGP_FVBNJ_P0088226	Unknown likely coding	CCDS22253, CCDS72114	Q3TLK9 Q543X5 Q60809	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,062 bps, Translation length: 179 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q60809

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS22253, CCDS72114

Version

MGP_FVBNJ_T0088226.1

Type

Unknown likely coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0088226.1

Summary

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Transcript: MGP_FVBNJ_T0088226.1

Summary

About Us

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