Transcript: MGP_FVBNJ_T0085486.1

Description

CTR9 homolog, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:109345]

Gene Synonyms

AA409336, Kiaa0155, Sh2bp1, Tsbp, Tsp, mKIAA0155

Location

Chromosome 7: 109,645,521-109,672,872 forward strand.

Reference strain equivalent

Ctr9

About this transcript

This transcript has 25 exons, is annotated with 52 domains and features and maps to 378 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0032639.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0085486.1	-	4300	1173aa	MGP_FVBNJ_P0085486	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21750	Q62018	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0085489.1	-	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0085493.1	-	392	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0085487.1	-	2991	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0085492.1	-	1597	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0085488.1	-	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0085490.1	-	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0085491.1	-	437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 4,300 bps, Translation length: 1,173 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62018

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS21750

Version

MGP_FVBNJ_T0085486.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0085486.1

Summary

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Transcript: MGP_FVBNJ_T0085486.1

Summary

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