Transcript: MGP_FVBNJ_T0083268.1

Description

polynucleotide kinase 3'- phosphatase [Source:MGI Symbol;Acc:MGI:1891698]

Gene Synonyms

1810009G08Rik, PNK

Location

Chromosome 7: 43,667,848-43,674,635 forward strand.

Reference strain equivalent

Pnkp

About this transcript

This transcript has 17 exons, is annotated with 31 domains and features and maps to 292 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0031962.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0083270.1	-	2184	522aa	MGP_FVBNJ_P0083270	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0083268.1	-	1770	522aa	MGP_FVBNJ_P0083268	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39945, CCDS71955	A0A0J9YTV1 A0A0J9YUF9 A0A0J9YUT2 A0A0J9YV48 A0A0J9YVH5 A0A0J9YVJ6 A0A140LIZ1 A0A140LJ53 D3YZV7 E9Q9A5 G5E8N7	-
MGP_FVBNJ_T0083274.1	-	1550	486aa	MGP_FVBNJ_P0083274	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0083281.1	-	454	151aa	MGP_FVBNJ_P0083281	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0083269.1	-	213	48aa	MGP_FVBNJ_P0083269	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0083280.1	-	444	148aa	MGP_FVBNJ_P0083280	Non stop decay		-	-
MGP_FVBNJ_T0083276.1	-	1674	59aa	MGP_FVBNJ_P0083276	Nonsense mediated decay		-	-
MGP_FVBNJ_T0083275.1	-	1573	180aa	MGP_FVBNJ_P0083275	Nonsense mediated decay		-	-
MGP_FVBNJ_T0083277.1	-	1497	426aa	MGP_FVBNJ_P0083277	Nonsense mediated decay		-	-
MGP_FVBNJ_T0083272.1	-	990	53aa	MGP_FVBNJ_P0083272	Nonsense mediated decay		-	-
MGP_FVBNJ_T0083273.1	-	933	53aa	MGP_FVBNJ_P0083273	Nonsense mediated decay		-	-
MGP_FVBNJ_T0083271.1	-	1975	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0083278.1	-	954	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0083279.1	-	860	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0083282.1	-	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 1,770 bps, Translation length: 522 residues

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS39945, CCDS71955

Version

MGP_FVBNJ_T0083268.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0083268.1

Summary

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Transcript: MGP_FVBNJ_T0083268.1

Summary

About Us

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