Transcript: MGP_FVBNJ_T0080664.1

Description

PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:MGI Symbol;Acc:MGI:1914783]

Gene Synonyms

4632409B19Rik, AW214454, AW261454, Kiaa1230

Location

Chromosome 6: 143,420,074-143,557,966 forward strand.

Reference strain equivalent

Ppfibp1

About this transcript

This transcript has 27 exons, is annotated with 39 domains and features and maps to 356 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0031265.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0080666.1	-	4799	980aa	MGP_FVBNJ_P0080666	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0080664.1	-	4868	969aa	MGP_FVBNJ_P0080664	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39715, CCDS51958	A0A0N4SUZ5 A0A0N4SVG3 F6S1C4 F6YZ95 F7CUU8 Q8C8U0	-
MGP_FVBNJ_T0080675.1	-	761	253aa	MGP_FVBNJ_P0080675	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0080670.1	-	727	242aa	MGP_FVBNJ_P0080670	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0080677.1	-	579	193aa	MGP_FVBNJ_P0080677	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0080669.1	-	547	130aa	MGP_FVBNJ_P0080669	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0080665.1	-	530	25aa	MGP_FVBNJ_P0080665	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0080671.1	-	706	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0080672.1	-	5105	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0080673.1	-	3888	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0080676.1	-	1191	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0080674.1	-	724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 27, Coding exons: 25, Transcript length: 4,868 bps, Translation length: 969 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C8U0

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS39715, CCDS51958

Version

MGP_FVBNJ_T0080664.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0080664.1

Summary

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Transcript: MGP_FVBNJ_T0080664.1

Summary

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