Transcript: MGP_FVBNJ_T0079585.1

Description

C-type lectin domain family 4, member e [Source:MGI Symbol;Acc:MGI:1861232]

Gene Synonyms

C86253, Clecsf9, Mincle

Location

Chromosome 6: 119,487,688-119,495,769 reverse strand.

Reference strain equivalent

Clec4e

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features and maps to 204 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0031013.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0079585.1	-	2518	214aa	MGP_FVBNJ_P0079585	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20514	H3BJQ5 H3BL75 Q4FK29 Q9R0Q8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0079589.1	-	729	185aa	MGP_FVBNJ_P0079589	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0079590.1	-	370	52aa	MGP_FVBNJ_P0079590	Nonsense mediated decay		-	-
MGP_FVBNJ_T0079591.1	-	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0079586.1	-	4804	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0079588.1	-	4014	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0079587.1	-	2234	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,518 bps, Translation length: 214 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9R0Q8

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS20514

Version

MGP_FVBNJ_T0079585.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0079585.1

Summary

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Transcript: MGP_FVBNJ_T0079585.1

Summary

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