Transcript: MGP_FVBNJ_T0079536.1

Description

apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 [Source:MGI Symbol;Acc:MGI:103298]

Gene Synonyms

Cdar1

Location

Chromosome 6: 118,782,597-118,807,343 reverse strand.

Reference strain equivalent

Apobec1

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features and maps to 217 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0030998.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0079536.1	-	2265	229aa	MGP_FVBNJ_P0079536	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20498	A0A0N4SV86 A0A0N4SVL6 A0A0N4SW85 D3Z675 P51908 Q3U9G8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0079538.1	-	2127	229aa	MGP_FVBNJ_P0079538	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0079537.1	-	2072	229aa	MGP_FVBNJ_P0079537	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0079540.1	-	775	113aa	MGP_FVBNJ_P0079540	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0079539.1	-	666	121aa	MGP_FVBNJ_P0079539	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0079541.1	-	372	43aa	MGP_FVBNJ_P0079541	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0079542.1	-	360	25aa	MGP_FVBNJ_P0079542	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0079543.1	-	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0079544.1	-	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 2,265 bps, Translation length: 229 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51908

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS20498

Version

MGP_FVBNJ_T0079536.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0079536.1

Summary

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Transcript: MGP_FVBNJ_T0079536.1

Summary

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