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Transcript: MGP_FVBNJ_T0069903.1

Description

putative homeodomain transcription factor 2 [Source:MGI Symbol;Acc:MGI:1916020]

Gene Synonyms

1110054G21Rik, 9530062N20Rik, AI447096, C77923

Location

Chromosome 5: 17,390,683-17,514,118 reverse strand.

Reference strain equivalent

Phtf2

About this transcript

This transcript has 18 exons, is annotated with 18 domains and features and maps to 354 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0029083.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0069903.1-4840747aaMGP_FVBNJ_P0069903
 
Protein coding
CCDS51426A0A0R4J1Q1 D6RJJ1 F6W0Y3
F6X6S4 		Ensembl Canonical
MGP_FVBNJ_T0069904.1-2282169aaMGP_FVBNJ_P0069904
 
Nonsense mediated decay
--
MGP_FVBNJ_T0069906.1-62119aaMGP_FVBNJ_P0069906
 
Nonsense mediated decay
--
MGP_FVBNJ_T0069909.1-48053aaMGP_FVBNJ_P0069909
 
Nonsense mediated decay
--
MGP_FVBNJ_T0069905.1-520No protein-
 
Processed transcript
--
MGP_FVBNJ_T0069907.1-2044No protein-
 
Retained intron
--
MGP_FVBNJ_T0069908.1-2002No protein-
 
Retained intron
--

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 4,840 bps, Translation length: 747 residues

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS51426

Version

MGP_FVBNJ_T0069903.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.