Transcript: MGP_FVBNJ_T0063249.1

Description

synaptopodin 2 [Source:MGI Symbol;Acc:MGI:2153070]

Gene Synonyms

1110069I04Rik, 2310068J10Rik, 9530006G20Rik, AI848603, Myo, myopodin

Location

Chromosome 3: 117,927,308-118,087,237 reverse strand.

Reference strain equivalent

Synpo2

About this transcript

This transcript has 5 exons, is annotated with 36 domains and features and maps to 228 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0027632.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0063249.1	-	7063	1257aa	MGP_FVBNJ_P0063249	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51063	A0A0G2JDM5 D3YVV9 E9Q1U2 F6WWS1 Q91YE8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0063252.1	-	9203	1087aa	MGP_FVBNJ_P0063252	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0063251.1	-	6937	1198aa	MGP_FVBNJ_P0063251	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0063250.1	-	3849	215aa	MGP_FVBNJ_P0063250	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0063254.1	-	3719	757aa	MGP_FVBNJ_P0063254	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0063253.1	-	1297	185aa	MGP_FVBNJ_P0063253	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0063255.1	-	391	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 7,063 bps, Translation length: 1,257 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q91YE8

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS51063

Version

MGP_FVBNJ_T0063249.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0063249.1

Summary

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Transcript: MGP_FVBNJ_T0063249.1

Summary

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