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Transcript: MGP_FVBNJ_T0062599.1

Description

protein tyrosine phosphatase, non-receptor type 22 (lymphoid) [Source:MGI Symbol;Acc:MGI:107170]

Gene Synonyms

70zpep, PEP, Ptpn8

Location

Chromosome 3: 98,977,376-99,030,504 forward strand.

Reference strain equivalent

Ptpn22

About this transcript

This transcript has 23 exons, is annotated with 2 domains and features and maps to 291 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0027489.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0062600.1-2743802aaMGP_FVBNJ_P0062600
 
Protein coding
-Ensembl Canonical
MGP_FVBNJ_T0062599.1-2757715aaMGP_FVBNJ_P0062599
 
Nonsense mediated decay
CCDS38577E9QAS3 P29352 -
MGP_FVBNJ_T0062601.1-739No protein-
 
Processed transcript
--
MGP_FVBNJ_T0062604.1-570No protein-
 
Processed transcript
--
MGP_FVBNJ_T0062603.1-2169No protein-
 
Retained intron
--
MGP_FVBNJ_T0062602.1-1844No protein-
 
Retained intron
--
MGP_FVBNJ_T0062606.1-649No protein-
 
Retained intron
--
MGP_FVBNJ_T0062605.1-558No protein-
 
Retained intron
--

Summary

Statistics

Exons: 23, Coding exons: 18, Transcript length: 2,757 bps, Translation length: 715 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P29352

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS38577

Version

MGP_FVBNJ_T0062599.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.