Transcript: MGP_FVBNJ_T0060149.1

Description

coiled-coil domain containing 39 [Source:MGI Symbol;Acc:MGI:1289263]

Gene Synonyms

4921507O14Rik, AI447426, AI844750, D3Ertd789e, b2b1304Clo, b2b1735Clo, b2b2025.1Clo

Location

Chromosome 3: 29,891,374-29,929,333 reverse strand.

Reference strain equivalent

Ccdc39

About this transcript

This transcript has 20 exons, is annotated with 24 domains and features and maps to 257 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0026941.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0060149.1	-	3616	937aa	MGP_FVBNJ_P0060149	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17304	Q9D5Y1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0060152.1	-	2745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0060151.1	-	2640	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0060154.1	-	1567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0060153.1	-	1056	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0060150.1	-	423	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,616 bps, Translation length: 937 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D5Y1

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS17304

Version

MGP_FVBNJ_T0060149.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0060149.1

Summary

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Transcript: MGP_FVBNJ_T0060149.1

Summary

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