Transcript: MGP_FVBNJ_T0056807.1

Description

transmembrane protein 62 [Source:MGI Symbol;Acc:MGI:2139461]

Gene Synonyms

B830009D23Rik, C77355

Location

Chromosome 2: 117,006,282-117,036,999 forward strand.

Reference strain equivalent

Tmem62

About this transcript

This transcript has 12 exons, is annotated with 3 domains and features and maps to 319 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0026173.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0056808.1	-	2631	643aa	MGP_FVBNJ_P0056808	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0056807.1	-	2605	333aa	MGP_FVBNJ_P0056807	Nonsense mediated decay	CCDS16629	A2AQ56 D6RH67 Q8BXJ9	-
MGP_FVBNJ_T0056810.1	-	457	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0056811.1	-	275	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0056812.1	-	780	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0056809.1	-	408	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 2,605 bps, Translation length: 333 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BXJ9

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS16629

Version

MGP_FVBNJ_T0056807.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0056807.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_FVBNJ_T0056807.1

Summary

About Us

Get help

Our sister sites

Follow us