Transcript: MGP_FVBNJ_T0047918.1

Description

UBX domain protein 6 [Source:MGI Symbol;Acc:MGI:1913780]

Gene Synonyms

1200008L11Rik, 2210415J11Rik, AU040909, Ubxd1, Ubxdc2

Location

Chromosome 17: 54,393,069-54,401,052 reverse strand.

Reference strain equivalent

Ubxn6

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features and maps to 242 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0023705.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0047918.1	-	2949	442aa	MGP_FVBNJ_P0047918	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28893	B8JJA4 Q99PL6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0047924.1	-	664	154aa	MGP_FVBNJ_P0047924	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0047922.1	-	831	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0047920.1	-	3476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0047919.1	-	2769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0047923.1	-	1079	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0047921.1	-	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,949 bps, Translation length: 442 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99PL6

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS28893

Version

MGP_FVBNJ_T0047918.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0047918.1

Summary

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Transcript: MGP_FVBNJ_T0047918.1

Summary

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