Transcript: MGP_FVBNJ_T0044201.1

Description

ATPase, H+ transporting, lysosomal V1 subunit A [Source:MGI Symbol;Acc:MGI:1201780]

Gene Synonyms

AI647066, Atp6a1, Atp6a2, Atp6v1a1, VA68, VPP2, lysosomal 70kDa

Location

Chromosome 16: 40,588,295-40,642,911 reverse strand.

Reference strain equivalent

Atp6v1a

About this transcript

This transcript has 15 exons, is annotated with 24 domains and features and maps to 357 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0022642.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0044201.1	-	4234	617aa	MGP_FVBNJ_P0044201	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28182	D3YWH3 D3YZ23 D3Z1B9 P50516	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0044202.1	-	3896	617aa	MGP_FVBNJ_P0044202	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0044204.1	-	894	237aa	MGP_FVBNJ_P0044204	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0044205.1	-	629	196aa	MGP_FVBNJ_P0044205	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0044206.1	-	440	77aa	MGP_FVBNJ_P0044206	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0044203.1	-	3093	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 4,234 bps, Translation length: 617 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P50516

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS28182

Version

MGP_FVBNJ_T0044201.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0044201.1

Summary

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Transcript: MGP_FVBNJ_T0044201.1

Summary

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