Mouse FVB/NJ (FVB_NJ_v1)
Description

pre-mRNA processing factor 40B [Source:MGI Symbol;Acc:MGI:1925583]

Gene Synonyms

2610317D23Rik, Hypc

Location
Reference strain equivalent
About this transcript

This transcript has 8 exons, is annotated with 18 domains and features and maps to 68 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0042243.1-3303873aaMGP_FVBNJ_P0042243
 
Protein coding
-Ensembl Canonical
MGP_FVBNJ_T0042246.1-3124870aaMGP_FVBNJ_P0042246
 
Protein coding
--
MGP_FVBNJ_T0042244.1-3047857aaMGP_FVBNJ_P0042244
 
Protein coding
--
MGP_FVBNJ_T0042245.1-2619852aaMGP_FVBNJ_P0042245
 
Protein coding
--
MGP_FVBNJ_T0042251.1-887189aaMGP_FVBNJ_P0042251
 
Protein coding
--
MGP_FVBNJ_T0042250.1-886256aaMGP_FVBNJ_P0042250
 
Protein coding
--
MGP_FVBNJ_T0042252.1-77586aaMGP_FVBNJ_P0042252
 
Protein coding
--
MGP_FVBNJ_T0042238.1-658136aaMGP_FVBNJ_P0042238
 
Protein coding
CCDS27818A0A0R4J1S2 D3Z1Y9 D3Z4N6
D6RD12 E9QMI6 E9QP07
F6QF44 F6W479 F6XW22
-
MGP_FVBNJ_T0042242.1-100092aaMGP_FVBNJ_P0042242
 
Nonsense mediated decay
--
MGP_FVBNJ_T0042239.1-4064No protein-
 
Retained intron
--
MGP_FVBNJ_T0042240.1-2993No protein-
 
Retained intron
--
MGP_FVBNJ_T0042241.1-2740No protein-
 
Retained intron
--
MGP_FVBNJ_T0042247.1-906No protein-
 
Retained intron
--
MGP_FVBNJ_T0042248.1-818No protein-
 
Retained intron
--
MGP_FVBNJ_T0042249.1-590No protein-
 
Retained intron
--
Statistics

Exons: 8, Coding exons: 7, Transcript length: 658 bps, Translation length: 136 residues

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS27818

Version

MGP_FVBNJ_T0042238.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.