Transcript: MGP_FVBNJ_T0040399.1

Description

cadherin 10 [Source:MGI Symbol;Acc:MGI:107436]

Gene Synonyms

A830016G23Rik, C030003B10Rik, C030011H18Rik, T2-cadherin

Location

Chromosome 15: 15,385,049-15,581,002 forward strand.

Reference strain equivalent

Cdh10

About this transcript

This transcript has 12 exons, is annotated with 48 domains and features and maps to 243 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0021557.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0040402.1	-	3407	788aa	MGP_FVBNJ_P0040402	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0040399.1	-	3176	788aa	MGP_FVBNJ_P0040399	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37047	H3BKV8 P70408	-
MGP_FVBNJ_T0040403.1	-	2230	419aa	MGP_FVBNJ_P0040403	Nonsense mediated decay		-	-
MGP_FVBNJ_T0040400.1	-	3760	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0040401.1	-	3680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0040404.1	-	1884	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,176 bps, Translation length: 788 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P70408

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS37047

Version

MGP_FVBNJ_T0040399.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0040399.1

Summary

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Transcript: MGP_FVBNJ_T0040399.1

Summary

About Us

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