Transcript: MGP_FVBNJ_T0033550.1

Description

septin 9 [Source:MGI Symbol;Acc:MGI:1858222]

Gene Synonyms

Kiaa0991, MSF1, Msf, PNUTL4, SL3-3 integration site 1, Sint1

Location

Chromosome 11: 115,060,409-115,229,013 forward strand.

Reference strain equivalent

Septin9

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features and maps to 248 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0019270.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0033550.1	-	3613	583aa	MGP_FVBNJ_P0033550	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25684, CCDS48990, CCDS48991	A2A6U3 A2A6U5 A8Y5D3 Q80UG5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0033551.1	-	3866	565aa	MGP_FVBNJ_P0033551	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0033552.1	-	3493	576aa	MGP_FVBNJ_P0033552	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0033554.1	-	778	242aa	MGP_FVBNJ_P0033554	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0033553.1	-	374	74aa	MGP_FVBNJ_P0033553	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0033555.1	-	4863	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0033556.1	-	647	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0033557.1	-	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,613 bps, Translation length: 583 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80UG5

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS25684, CCDS48990, CCDS48991

Version

MGP_FVBNJ_T0033550.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0033550.1

Summary

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Transcript: MGP_FVBNJ_T0033550.1

Summary

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