Transcript: MGP_FVBNJ_T0023805.1

Description

calpain 2 [Source:MGI Symbol;Acc:MGI:88264]

Gene Synonyms

AI326419, Capa-2, Capa2, m-calpain, m-calpin

Location

Chromosome 1: 178,304,419-178,354,864 reverse strand.

Reference strain equivalent

Capn2

About this transcript

This transcript has 21 exons, is annotated with 32 domains and features and maps to 374 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0016732.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0023805.1	-	3225	700aa	MGP_FVBNJ_P0023805	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35813	O08529	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0023809.1	-	3011	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0023808.1	-	2367	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0023807.1	-	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0023806.1	-	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,225 bps, Translation length: 700 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08529

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS35813

Version

MGP_FVBNJ_T0023805.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0023805.1

Summary

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Transcript: MGP_FVBNJ_T0023805.1

Summary

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