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Transcript: MGP_FVBNJ_T0022474.1

Description

Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2682334]

Gene Synonyms

9430023P16Rik, Est1c, Kiaa0250, mKIAA0250

Location

Chromosome 1: 148,767,627-148,833,114 reverse strand.

Reference strain equivalent

Smg7

About this transcript

This transcript has 23 exons, is annotated with 23 domains and features and maps to 270 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0016437.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0022475.1-55251146aaMGP_FVBNJ_P0022475
 
Protein coding
-Ensembl Canonical
MGP_FVBNJ_T0022474.1-55001134aaMGP_FVBNJ_P0022474
 
Protein coding
CCDS35740, CCDS48394, CCDS48395Q5RJH6 -
MGP_FVBNJ_T0022476.1-39281138aaMGP_FVBNJ_P0022476
 
Protein coding
--
MGP_FVBNJ_T0022478.1-672No protein-
 
Processed transcript
--
MGP_FVBNJ_T0022477.1-574No protein-
 
Processed transcript
--
MGP_FVBNJ_T0022479.1-525No protein-
 
Retained intron
--

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 5,500 bps, Translation length: 1,134 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5RJH6

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS35740, CCDS48394, CCDS48395

Version

MGP_FVBNJ_T0022474.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.