Mouse FVB/NJ (FVB_NJ_v1)
Description

signal transducer and activator of transcription 1 [Source:MGI Symbol;Acc:MGI:103063]

Gene Synonyms

2010005J02Rik, AA408197

Location
Reference strain equivalent
About this transcript

This transcript has 23 exons, is annotated with 27 domains and features and maps to 221 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0019577.1-3998755aaMGP_FVBNJ_P0019577
 
Protein coding
-Ensembl Canonical
MGP_FVBNJ_T0019570.1-5151749aaMGP_FVBNJ_P0019570
 
Protein coding
--
MGP_FVBNJ_T0019572.1-4241749aaMGP_FVBNJ_P0019572
 
Protein coding
--
MGP_FVBNJ_T0019579.1-3298243aaMGP_FVBNJ_P0019579
 
Protein coding
--
MGP_FVBNJ_T0019569.1-2834712aaMGP_FVBNJ_P0019569
 
Protein coding
CCDS56628, CCDS78581A0A087WRI1 A0A087WSP5 A0A087WSQ5
Q8C3V4 Q8CFQ1 Q99K94
-
MGP_FVBNJ_T0019571.1-2803712aaMGP_FVBNJ_P0019571
 
Protein coding
--
MGP_FVBNJ_T0019574.1-2588712aaMGP_FVBNJ_P0019574
 
Protein coding
--
MGP_FVBNJ_T0019573.1-715154aaMGP_FVBNJ_P0019573
 
Protein coding
--
MGP_FVBNJ_T0019580.1-886130aaMGP_FVBNJ_P0019580
 
Nonsense mediated decay
--
MGP_FVBNJ_T0019576.1-1344No protein-
 
Retained intron
--
MGP_FVBNJ_T0019578.1-827No protein-
 
Retained intron
--
MGP_FVBNJ_T0019575.1-548No protein-
 
Retained intron
--
Statistics

Exons: 23, Coding exons: 21, Transcript length: 2,834 bps, Translation length: 712 residues

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS56628, CCDS78581

Version

MGP_FVBNJ_T0019569.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.