Transcript: MGP_FVBNJ_T0019154.1

Description

lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]

Gene Synonyms

A630028F14Rik, VIP36-like, VIPL, Vipl

Location

Chromosome 1: 32,869,338-32,889,604 reverse strand.

Reference strain equivalent

Lman2l

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features and maps to 48 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0015769.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0019158.1	-	2316	358aa	MGP_FVBNJ_P0019158	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0019155.1	-	3412	347aa	MGP_FVBNJ_P0019155	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0019154.1	-	705	204aa	MGP_FVBNJ_P0019154	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14878, CCDS78563	A0A0A6YX25 D3Z4P2 F6QN75 J3QNZ7 J3QPK9 P59481	-
MGP_FVBNJ_T0019159.1	-	634	123aa	MGP_FVBNJ_P0019159	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0019157.1	-	2200	157aa	MGP_FVBNJ_P0019157	Nonsense mediated decay		-	-
MGP_FVBNJ_T0019156.1	-	4046	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0019160.1	-	1513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 705 bps, Translation length: 204 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P59481

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS14878, CCDS78563

Version

MGP_FVBNJ_T0019154.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0019154.1

Summary

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Transcript: MGP_FVBNJ_T0019154.1

Summary

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