Mouse FVB/NJ (FVB_NJ_v1)
Description

AT rich interactive domain 5A (MRF1-like) [Source:MGI Symbol;Acc:MGI:2443039]

Gene Synonyms

D430024K22Rik, Mrf1

Location
Reference strain equivalent
About this transcript

This transcript has 7 exons, is annotated with 18 domains and features and maps to 102 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0019136.1-3002684aaMGP_FVBNJ_P0019136
 
Protein coding
-Ensembl Canonical
MGP_FVBNJ_T0019135.1-5504532aaMGP_FVBNJ_P0019135
 
Protein coding
--
MGP_FVBNJ_T0019134.1-2270619aaMGP_FVBNJ_P0019134
 
Protein coding
--
MGP_FVBNJ_T0019139.1-2149590aaMGP_FVBNJ_P0019139
 
Protein coding
--
MGP_FVBNJ_T0019128.1-870256aaMGP_FVBNJ_P0019128
 
Protein coding
CCDS14876, CCDS48239, CCDS69878, CCDS78560D3Z085 D3Z0W0 D3Z7U1
J3KMU9 Q3U108
-
MGP_FVBNJ_T0019133.1-441120aaMGP_FVBNJ_P0019133
 
Protein coding
--
MGP_FVBNJ_T0019132.1-205659aaMGP_FVBNJ_P0019132
 
Nonsense mediated decay
--
MGP_FVBNJ_T0019131.1-739No protein-
 
Processed transcript
--
MGP_FVBNJ_T0019137.1-5013No protein-
 
Retained intron
--
MGP_FVBNJ_T0019130.1-3118No protein-
 
Retained intron
--
MGP_FVBNJ_T0019140.1-563No protein-
 
Retained intron
--
MGP_FVBNJ_T0019138.1-425No protein-
 
Retained intron
--
MGP_FVBNJ_T0019129.1-407No protein-
 
Retained intron
--
MGP_FVBNJ_T0019141.1-400No protein-
 
Retained intron
--
Statistics

Exons: 7, Coding exons: 7, Transcript length: 870 bps, Translation length: 256 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3U108

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS14876, CCDS48239, CCDS69878, CCDS78560

Version

MGP_FVBNJ_T0019128.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.