Description
TAR DNA binding protein [Source:MGI Symbol;Acc:MGI:2387629]
Gene Synonyms
1190002A23Rik, C85084, TARDBP, TDP-43, Tdp43
Location
Chromosome 4: 145,244,728-145,259,902 reverse strand.
Reference strain equivalent
About this transcript
This transcript has 8 exons, is annotated with 54 domains and features and maps to 489 oligo probes.
Gene
This transcript is a product of gene MGP_FVBNJ_G0028906.1 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| MGP_FVBNJ_T0068889.1 | - | 7457 | 414aa | MGP_FVBNJ_P0068889 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS38967, CCDS38968, CCDS38969, CCDS38970, CCDS38971 | A0A087WNY6 A0A087WP57 A0A087WQ63 A0A087WQA5 A0A087WQT4 A0A087WQX8 A0A087WR97 A0A087WRP4 A0A087WRZ5 A0A087WS17 A0A087WS74 A0A087WSC6 A0A087WSE4 A0A087WSH7 H3BJV1 Q544R5 Q6VYI4 Q6VYI5 Q8BLD4 Q8R0B4 Q921F2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| MGP_FVBNJ_T0068891.1 | - | 6727 | 304aa | MGP_FVBNJ_P0068891 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068890.1 | - | 6709 | 298aa | MGP_FVBNJ_P0068890 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068892.1 | - | 6639 | 302aa | MGP_FVBNJ_P0068892 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068907.1 | - | 2118 | 295aa | MGP_FVBNJ_P0068907 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068911.1 | - | 1096 | 298aa | MGP_FVBNJ_P0068911 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068912.1 | - | 1011 | 304aa | MGP_FVBNJ_P0068912 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068913.1 | - | 923 | 302aa | MGP_FVBNJ_P0068913 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068916.1 | - | 818 | 243aa | MGP_FVBNJ_P0068916 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068909.1 | - | 787 | 19aa | MGP_FVBNJ_P0068909 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068910.1 | - | 748 | 84aa | MGP_FVBNJ_P0068910 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068917.1 | - | 740 | 149aa | MGP_FVBNJ_P0068917 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068914.1 | - | 709 | 199aa | MGP_FVBNJ_P0068914 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068908.1 | - | 577 | 128aa | MGP_FVBNJ_P0068908 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068895.1 | - | 529 | 98aa | MGP_FVBNJ_P0068895 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0068900.1 | - | 2006 | 298aa | MGP_FVBNJ_P0068900 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0068893.1 | - | 1773 | 298aa | MGP_FVBNJ_P0068893 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0068915.1 | - | 1411 | 84aa | MGP_FVBNJ_P0068915 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0068905.1 | - | 1304 | 285aa | MGP_FVBNJ_P0068905 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0068901.1 | - | 1011 | 34aa | MGP_FVBNJ_P0068901 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0068903.1 | - | 781 | 140aa | MGP_FVBNJ_P0068903 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0068902.1 | - | 741 | 175aa | MGP_FVBNJ_P0068902 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0068904.1 | - | 684 | 137aa | MGP_FVBNJ_P0068904 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0068896.1 | - | 676 | 88aa | MGP_FVBNJ_P0068896 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0068906.1 | - | 517 | 77aa | MGP_FVBNJ_P0068906 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0068897.1 | - | 908 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0068894.1 | - | 731 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0068898.1 | - | 637 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0068899.1 | - | 358 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0068918.1 | - | 370 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |