Transcript: MGP_DBA2J_T0080080.1

Description

tubby-like protein 3 [Source:MGI Symbol;Acc:MGI:1329045]

Gene Synonyms

2310022L06Rik, AI316887

Location

Chromosome 6: 125,756,989-125,792,568 reverse strand.

Reference strain equivalent

Tulp3

About this transcript

This transcript has 11 exons, is annotated with 28 domains and features and maps to 222 oligo probes.

Gene

This transcript is a product of gene MGP_DBA2J_G0031139.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_DBA2J_T0080080.1	-	3356	460aa	MGP_DBA2J_P0080080	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39647	A0A0N4SVN5 A0A0N4SW40 O88413	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_DBA2J_T0080085.1	-	1056	25aa	MGP_DBA2J_P0080085	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_DBA2J_T0080083.1	-	335	76aa	MGP_DBA2J_P0080083	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_DBA2J_T0080081.1	-	600	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_DBA2J_T0080084.1	-	3411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_DBA2J_T0080082.1	-	2443	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,356 bps, Translation length: 460 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O88413

CCDS

This transcript is a member of the Mouse DBA/2J CCDS set: CCDS39647

Version

MGP_DBA2J_T0080080.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_DBA2J_T0080080.1

Summary

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Transcript: MGP_DBA2J_T0080080.1

Summary

About Us

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