Transcript: MGP_DBA2J_T0047019.1

Description

mutS homolog 5 [Source:MGI Symbol;Acc:MGI:1329021]

Gene Synonyms

G7, Mut5

Location

Chromosome 17: 33,322,544-33,341,080 reverse strand.

Reference strain equivalent

Msh5

About this transcript

This transcript has 23 exons, is annotated with 5 domains and features and maps to 271 oligo probes.

Gene

This transcript is a product of gene MGP_DBA2J_G0023441.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_DBA2J_T0047021.1	-	2814	833aa	MGP_DBA2J_P0047021	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_DBA2J_T0047022.1	-	2677	833aa	MGP_DBA2J_P0047022	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_DBA2J_T0047025.1	-	2718	499aa	MGP_DBA2J_P0047025	Nonsense mediated decay		-	-
MGP_DBA2J_T0047024.1	-	2630	616aa	MGP_DBA2J_P0047024	Nonsense mediated decay		-	-
MGP_DBA2J_T0047026.1	-	2390	53aa	MGP_DBA2J_P0047026	Nonsense mediated decay		-	-
MGP_DBA2J_T0047023.1	-	1742	74aa	MGP_DBA2J_P0047023	Nonsense mediated decay		-	-
MGP_DBA2J_T0047031.1	-	591	67aa	MGP_DBA2J_P0047031	Nonsense mediated decay		-	-
MGP_DBA2J_T0047020.1	-	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_DBA2J_T0047028.1	-	1248	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_DBA2J_T0047030.1	-	855	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_DBA2J_T0047029.1	-	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_DBA2J_T0047027.1	-	279	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_DBA2J_T0047019.1	-	2649	791aa	MGP_DBA2J_P0047019	Unknown likely coding	CCDS28674	A0A0R4IZY8 G3UWT5 G3UYF3 G3UYF6 G3UZ06 G3UZB5	-

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 2,649 bps, Translation length: 791 residues

CCDS

This transcript is a member of the Mouse DBA/2J CCDS set: CCDS28674

Version

MGP_DBA2J_T0047019.1

Type

Unknown likely coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_DBA2J_T0047019.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_DBA2J_T0047019.1

Summary

About Us

Get help

Our sister sites

Follow us