Transcript: MGP_DBA2J_T0029679.1

Description

CTS telomere maintenance complex component 1 [Source:MGI Symbol;Acc:MGI:1916214]

Gene Synonyms

1500010J02Rik, AAF-132, AAF132

Location

Chromosome 11: 66,406,569-66,427,121 forward strand.

Reference strain equivalent

Ctc1

About this transcript

This transcript has 23 exons, is annotated with 7 domains and features and maps to 356 oligo probes.

Gene

This transcript is a product of gene MGP_DBA2J_G0018349.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_DBA2J_T0029683.1	-	3978	1212aa	MGP_DBA2J_P0029683	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_DBA2J_T0029679.1	-	4164	1211aa	MGP_DBA2J_P0029679	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36189, CCDS48824, CCDS70214	E0CXE7 E0CXT1 Q5SUQ9	-
MGP_DBA2J_T0029681.1	-	3989	965aa	MGP_DBA2J_P0029681	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_DBA2J_T0029682.1	-	3976	67aa	MGP_DBA2J_P0029682	Nonsense mediated decay		-	-
MGP_DBA2J_T0029687.1	-	823	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_DBA2J_T0029686.1	-	750	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_DBA2J_T0029684.1	-	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_DBA2J_T0029680.1	-	3040	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_DBA2J_T0029688.1	-	591	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_DBA2J_T0029689.1	-	530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_DBA2J_T0029690.1	-	516	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_DBA2J_T0029685.1	-	464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,164 bps, Translation length: 1,211 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SUQ9

CCDS

This transcript is a member of the Mouse DBA/2J CCDS set: CCDS36189, CCDS48824, CCDS70214

Version

MGP_DBA2J_T0029679.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_DBA2J_T0029679.1

Summary

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Transcript: MGP_DBA2J_T0029679.1

Summary

About Us

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