Ensembl mirror
More ▼
Search »
Mouse CBA/J (CBA_J_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_CBAJ_T0084237.1

Description

Bloom syndrome, RecQ helicase-like [Source:MGI Symbol;Acc:MGI:1328362]

Location

Chromosome 7: 88,507,131-88,517,415 reverse strand.

Reference strain equivalent

Blm

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features and maps to 107 oligo probes.

Gene

This transcript is a product of gene MGP_CBAJ_G0032086.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CBAJ_T0084239.1-47791422aaMGP_CBAJ_P0084239
 
Protein coding
-Ensembl Canonical
MGP_CBAJ_T0084238.1-46071419aaMGP_CBAJ_P0084238
 
Protein coding
--
MGP_CBAJ_T0084237.1-1368181aaMGP_CBAJ_P0084237
 
Protein coding
CCDS40000, CCDS52281A0A0U1RNI0 A0A0U1RPP0 A0A0U1RPS3
E9PZ97 O88700 		-
MGP_CBAJ_T0084243.1-46550aaMGP_CBAJ_P0084243
 
Nonsense mediated decay
--
MGP_CBAJ_T0084242.1-38341aaMGP_CBAJ_P0084242
 
Nonsense mediated decay
--
MGP_CBAJ_T0084240.1-540No protein-
 
Processed transcript
--
MGP_CBAJ_T0084244.1-3591No protein-
 
Retained intron
--
MGP_CBAJ_T0084245.1-2508No protein-
 
Retained intron
--
MGP_CBAJ_T0084246.1-748No protein-
 
Retained intron
--
MGP_CBAJ_T0084241.1-485No protein-
 
Retained intron
--

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,368 bps, Translation length: 181 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O88700

CCDS

This transcript is a member of the Mouse CBA/J CCDS set: CCDS40000, CCDS52281

Version

MGP_CBAJ_T0084237.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.