Transcript: MGP_CBAJ_T0029687.1

Description

eukaryotic translation initiation factor 4A1 [Source:MGI Symbol;Acc:MGI:95303]

Gene Synonyms

BM-010, Ddx2a, Eif4, Eif4a, initiation factor eIF-4A long form

Location

Chromosome 11: 75,480,779-75,487,387 reverse strand.

Reference strain equivalent

Eif4a1

About this transcript

This transcript has 12 exons, is annotated with 24 domains and features and maps to 430 oligo probes.

Gene

This transcript is a product of gene MGP_CBAJ_G0018272.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CBAJ_T0029687.1	-	1985	468aa	MGP_CBAJ_P0029687	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24904	K3W4Q6 P60843 Q5F2A7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CBAJ_T0029693.1	-	813	50aa	MGP_CBAJ_P0029693	Nonsense mediated decay		-	-
MGP_CBAJ_T0029690.1	-	807	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0029692.1	-	704	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0029695.1	-	493	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0029696.1	-	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0029694.1	-	403	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0029697.1	-	401	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0029691.1	-	386	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CBAJ_T0029689.1	-	3119	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CBAJ_T0029688.1	-	1797	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CBAJ_T0029699.1	-	802	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CBAJ_T0029698.1	-	453	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,985 bps, Translation length: 468 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P60843

CCDS

This transcript is a member of the Mouse CBA/J CCDS set: CCDS24904

Version

MGP_CBAJ_T0029687.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_CBAJ_T0029687.1

Summary

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Transcript: MGP_CBAJ_T0029687.1

Summary

About Us

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