Ensembl mirror
More ▼
Search »
Mouse CAST/EiJ (CAST_EiJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_CASTEiJ_T0088782.1

Description

CCR4-NOT transcription complex, subunit 7 [Source:MGI Symbol;Acc:MGI:1298230]

Gene Synonyms

AU022737, CAF-1, Caf1, Pop2

Location

Chromosome 8: 38,830,993-38,846,179 reverse strand.

Reference strain equivalent

Cnot7

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature and maps to 195 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0032569.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CASTEiJ_T0088787.1-2973285aaMGP_CASTEiJ_P0088787
 
Protein coding
-Ensembl Canonical
MGP_CASTEiJ_T0088783.1-2615285aaMGP_CASTEiJ_P0088783
 
Protein coding
--
MGP_CASTEiJ_T0088784.1-2542285aaMGP_CASTEiJ_P0088784
 
Protein coding
--
MGP_CASTEiJ_T0088786.1-2461248aaMGP_CASTEiJ_P0088786
 
Protein coding
--
MGP_CASTEiJ_T0088792.1-726No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0088788.1-679No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0088793.1-484No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0088794.1-407No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0088791.1-312No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0088785.1-3814No protein-
 
Retained intron
--
MGP_CASTEiJ_T0088789.1-840No protein-
 
Retained intron
--
MGP_CASTEiJ_T0088782.1-2438179aaMGP_CASTEiJ_P0088782
 
Unknown likely coding
CCDS22253, CCDS72114Q3TLK9 Q543X5 Q60809
-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 2,438 bps, Translation length: 179 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q60809

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS22253, CCDS72114

Version

MGP_CASTEiJ_T0088782.1

Type

Unknown likely coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.