Transcript: MGP_CASTEiJ_T0086206.1

Description

SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) [Source:MGI Symbol;Acc:MGI:1919742]

Gene Synonyms

2610207I05Rik, 5430435M13Rik, C130002K18Rik, Kiaa0421, mKIAA0421

Location

Chromosome 7: 113,538,303-113,655,438 reverse strand.

Reference strain equivalent

Smg1

About this transcript

This transcript has 63 exons, is annotated with 46 domains and features and maps to 573 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0031922.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0086206.1	-	13390	3658aa	MGP_CASTEiJ_P0086206	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40102	J3QMR1 J3QPA7 J3QQ22 Q8BKX6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0086207.1	-	12170	3582aa	MGP_CASTEiJ_P0086207	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0086210.1	-	1473	335aa	MGP_CASTEiJ_P0086210	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0086208.1	-	786	95aa	MGP_CASTEiJ_P0086208	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0086211.1	-	3819	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0086209.1	-	3630	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 63, Coding exons: 63, Transcript length: 13,390 bps, Translation length: 3,658 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BKX6

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS40102

Version

MGP_CASTEiJ_T0086206.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_CASTEiJ_T0086206.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_CASTEiJ_T0086206.1

Summary

About Us

Get help

Our sister sites

Follow us