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Transcript: MGP_CASTEiJ_T0072914.1

Description

CCR4-NOT transcription complex, subunit 6-like [Source:MGI Symbol;Acc:MGI:2443154]

Gene Synonyms

4932442K20Rik

Location

Chromosome 5: 95,775,129-95,859,953 reverse strand.

Reference strain equivalent

Cnot6l

About this transcript

This transcript has 12 exons, is annotated with 31 domains and features and maps to 517 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0028872.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CASTEiJ_T0072917.1-3169555aaMGP_CASTEiJ_P0072917
 
Protein coding
-Ensembl Canonical
MGP_CASTEiJ_T0072914.1-6748550aaMGP_CASTEiJ_P0072914
 
Protein coding
CCDS19448, CCDS51566D3YVH6 D3YXZ0 D3Z2G5
D3Z5R3 F8WJG1 Q8VEG6
-
MGP_CASTEiJ_T0072919.1-526130aaMGP_CASTEiJ_P0072919
 
Protein coding
--
MGP_CASTEiJ_T0072921.1-42087aaMGP_CASTEiJ_P0072921
 
Protein coding
--
MGP_CASTEiJ_T0072920.1-32999aaMGP_CASTEiJ_P0072920
 
Protein coding
--
MGP_CASTEiJ_T0072922.1-23255aaMGP_CASTEiJ_P0072922
 
Protein coding
--
MGP_CASTEiJ_T0072916.1-331346aaMGP_CASTEiJ_P0072916
 
Nonsense mediated decay
--
MGP_CASTEiJ_T0072915.1-3043No protein-
 
Retained intron
--
MGP_CASTEiJ_T0072918.1-784No protein-
 
Retained intron
--

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 6,748 bps, Translation length: 550 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VEG6

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS19448, CCDS51566

Version

MGP_CASTEiJ_T0072914.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.