Description
transcription factor 4 [Source:MGI Symbol;Acc:MGI:98506]
Gene Synonyms
5730422P05Rik, ASP-I2, E2-2, E2.2, ITF-2, ITF-2b, ITF2, Itf2, ME2, MITF-2A, MITF-2B, SEF-2, SEF2, SEF2-1, Sef2, TFE, Tcf-4, bHLHb19
Location
Chromosome 18: 68,869,966-69,105,147 forward strand.
Reference strain equivalent
About this transcript
This transcript has 7 exons, is annotated with 42 domains and features and maps to 73 oligo probes.
Gene
This transcript is a product of gene MGP_CASTEiJ_G0023746.1 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| MGP_CASTEiJ_T0049774.1 | - | 4252 | 692aa | MGP_CASTEiJ_P0049774 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, | |
| MGP_CASTEiJ_T0049775.1 | - | 8552 | 670aa | MGP_CASTEiJ_P0049775 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049779.1 | - | 7122 | 670aa | MGP_CASTEiJ_P0049779 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049780.1 | - | 3693 | 666aa | MGP_CASTEiJ_P0049780 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049820.1 | - | 3069 | 507aa | MGP_CASTEiJ_P0049820 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049778.1 | - | 3002 | 666aa | MGP_CASTEiJ_P0049778 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049776.1 | - | 2781 | 646aa | MGP_CASTEiJ_P0049776 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049791.1 | - | 2719 | 642aa | MGP_CASTEiJ_P0049791 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049777.1 | - | 2617 | 641aa | MGP_CASTEiJ_P0049777 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049816.1 | - | 2613 | 511aa | MGP_CASTEiJ_P0049816 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049796.1 | - | 2611 | 587aa | MGP_CASTEiJ_P0049796 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049793.1 | - | 2429 | 646aa | MGP_CASTEiJ_P0049793 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049801.1 | - | 2271 | 541aa | MGP_CASTEiJ_P0049801 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049786.1 | - | 2193 | 670aa | MGP_CASTEiJ_P0049786 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049798.1 | - | 2173 | 537aa | MGP_CASTEiJ_P0049798 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049781.1 | - | 2138 | 606aa | MGP_CASTEiJ_P0049781 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049784.1 | - | 2121 | 641aa | MGP_CASTEiJ_P0049784 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049804.1 | - | 2104 | 541aa | MGP_CASTEiJ_P0049804 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049788.1 | - | 1960 | 610aa | MGP_CASTEiJ_P0049788 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049811.1 | - | 1943 | 537aa | MGP_CASTEiJ_P0049811 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049803.1 | - | 1916 | 537aa | MGP_CASTEiJ_P0049803 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049807.1 | - | 1873 | 537aa | MGP_CASTEiJ_P0049807 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049827.1 | - | 1796 | 507aa | MGP_CASTEiJ_P0049827 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049808.1 | - | 1463 | 320aa | MGP_CASTEiJ_P0049808 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049817.1 | - | 959 | 271aa | MGP_CASTEiJ_P0049817 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049812.1 | - | 881 | 106aa | MGP_CASTEiJ_P0049812 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049782.1 | - | 848 | 220aa | MGP_CASTEiJ_P0049782 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049825.1 | - | 843 | 172aa | MGP_CASTEiJ_P0049825 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049799.1 | - | 831 | 167aa | MGP_CASTEiJ_P0049799 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049806.1 | - | 809 | 155aa | MGP_CASTEiJ_P0049806 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049824.1 | - | 809 | 100aa | MGP_CASTEiJ_P0049824 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049800.1 | - | 802 | 224aa | MGP_CASTEiJ_P0049800 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049818.1 | - | 765 | 220aa | MGP_CASTEiJ_P0049818 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049785.1 | - | 761 | 184aa | MGP_CASTEiJ_P0049785 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049795.1 | - | 733 | 201aa | MGP_CASTEiJ_P0049795 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049802.1 | - | 731 | 168aa | MGP_CASTEiJ_P0049802 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049826.1 | - | 619 | 121aa | MGP_CASTEiJ_P0049826 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049787.1 | - | 609 | 202aa | MGP_CASTEiJ_P0049787 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049805.1 | - | 582 | 119aa | MGP_CASTEiJ_P0049805 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049790.1 | - | 577 | 143aa | MGP_CASTEiJ_P0049790 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049792.1 | - | 568 | 145aa | MGP_CASTEiJ_P0049792 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049797.1 | - | 508 | 107aa | MGP_CASTEiJ_P0049797 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0049773.1 | - | 482 | 138aa | MGP_CASTEiJ_P0049773 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS29329, CCDS50315 | A0A0J9YTR9 A0A0J9YTU7 A0A0J9YTW1 A0A0J9YTX3 A0A0J9YU37 A0A0J9YU75 A0A0J9YU89 A0A0J9YU91 A0A0J9YU99 A0A0J9YUF5 A0A0J9YUG4 A0A0J9YUK1 A0A0J9YUP9 A0A0J9YUR0 A0A0J9YUS2 A0A0J9YUT3 A0A0J9YUT7 A0A0J9YUW9 A0A0J9YUX6 A0A0J9YUY3 A0A0J9YUZ0 A0A0J9YV39 A0A0J9YV50 A0A0J9YV54 A0A0J9YV88 A0A0J9YVB3 A0A0J9YVC6 A0A0J9YVG2 A0A0J9YVG8 A0A0J9YVI1 A0A140LIL4 A0A140LJA2 A0A140LJC0 E9Q8G4 Q60722 Q8BPX7 Q91XK1 Q91YV0 | - |
| MGP_CASTEiJ_T0049819.1 | - | 923 | 198aa | MGP_CASTEiJ_P0049819 | Nonsense mediated decay | - | - | |
| MGP_CASTEiJ_T0049783.1 | - | 812 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CASTEiJ_T0049814.1 | - | 784 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CASTEiJ_T0049823.1 | - | 780 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CASTEiJ_T0049794.1 | - | 617 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CASTEiJ_T0049815.1 | - | 448 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CASTEiJ_T0049789.1 | - | 353 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CASTEiJ_T0049810.1 | - | 332 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CASTEiJ_T0049821.1 | - | 4023 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0049830.1 | - | 3675 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0049828.1 | - | 3601 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0049809.1 | - | 2763 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0049831.1 | - | 1001 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0049813.1 | - | 665 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0049822.1 | - | 373 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0049829.1 | - | 808 | 229aa | MGP_CASTEiJ_P0049829 | Unknown likely coding | - | - |