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Transcript: MGP_CASTEiJ_T0035216.1

Description

neurexin III [Source:MGI Symbol;Acc:MGI:1096389]

Gene Synonyms

4933401A11Rik, 9330112C09Rik, D12Bwg0831e, neurexin III alpha, neurexin III beta

Location

Chromosome 12: 84,207,160-84,349,588 forward strand.

Reference strain equivalent

Nrxn3

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features and maps to 22 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0019285.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CASTEiJ_T0035223.1-79091571aaMGP_CASTEiJ_P0035223
 
Protein coding
-Ensembl Canonical
MGP_CASTEiJ_T0035226.1-46211100aaMGP_CASTEiJ_P0035226
 
Protein coding
--
MGP_CASTEiJ_T0035228.1-3639567aaMGP_CASTEiJ_P0035228
 
Protein coding
--
MGP_CASTEiJ_T0035227.1-33031100aaMGP_CASTEiJ_P0035227
 
Protein coding
--
MGP_CASTEiJ_T0035229.1-2689430aaMGP_CASTEiJ_P0035229
 
Protein coding
--
MGP_CASTEiJ_T0035220.1-69251391aaMGP_CASTEiJ_P0035220
 
Nonsense mediated decay
--
MGP_CASTEiJ_T0035219.1-55611009aaMGP_CASTEiJ_P0035219
 
Nonsense mediated decay
--
MGP_CASTEiJ_T0035221.1-676No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0035224.1-646No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0035222.1-531No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0035225.1-525No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0035217.1-4089No protein-
 
Retained intron
--
MGP_CASTEiJ_T0035218.1-2281No protein-
 
Retained intron
--
MGP_CASTEiJ_T0035216.1-1800258aaMGP_CASTEiJ_P0035216
 
Unknown likely coding
CCDS49134, CCDS56856, CCDS79143A0A087WPQ9 E9Q2X2 E9Q3Q4
Q6P9K9 Q8C985 		-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,800 bps, Translation length: 258 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P9K9, Q8C985

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS49134, CCDS56856, CCDS79143

Version

MGP_CASTEiJ_T0035216.1

Type

Unknown likely coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.