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Transcript: MGP_CASTEiJ_T0031743.1

Description

retinoic acid receptor, alpha [Source:MGI Symbol;Acc:MGI:97856]

Gene Synonyms

Nr1b1, RAR, RAR alpha 1, RARalpha1

Location

Chromosome 11: 101,433,194-101,487,745 forward strand.

Reference strain equivalent

Rara

About this transcript

This transcript has 9 exons, is annotated with 42 domains and features and maps to 240 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0018387.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CASTEiJ_T0031745.1-3383462aaMGP_CASTEiJ_P0031745
 
Protein coding
-Ensembl Canonical
MGP_CASTEiJ_T0031749.1-3232459aaMGP_CASTEiJ_P0031749
 
Protein coding
--
MGP_CASTEiJ_T0031747.1-3128462aaMGP_CASTEiJ_P0031747
 
Protein coding
--
MGP_CASTEiJ_T0031744.1-2464462aaMGP_CASTEiJ_P0031744
 
Protein coding
--
MGP_CASTEiJ_T0031743.1-2375462aaMGP_CASTEiJ_P0031743
 
Protein coding
CCDS36304, CCDS48905P11416 Q3U3R3 -
MGP_CASTEiJ_T0031746.1-359No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0031748.1-310No protein-
 
Processed transcript
--

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,375 bps, Translation length: 462 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11416

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS36304, CCDS48905

Version

MGP_CASTEiJ_T0031743.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.