Transcript: MGP_CASTEiJ_T0080008.1

Description

lysine (K)-specific demethylase 5A [Source:MGI Symbol;Acc:MGI:2136980]

Gene Synonyms

AA409370, C76986, Jarid1a, RBP2, Rbbp2, Rbp2

Location

Reference strain equivalent

About this transcript

This transcript has 21 exons, is annotated with 4 domains and features and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0080009.1	-	10935	1690aa	MGP_CASTEiJ_P0080009	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0080012.1	-	460	153aa	MGP_CASTEiJ_P0080012	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0080008.1	-	3665	814aa	MGP_CASTEiJ_P0080008	Nonsense mediated decay	CCDS51889	A0A0N4SUK6 A0A0N4SVA7 E9Q8F1 Q3UXZ9 Q921T5	-
MGP_CASTEiJ_T0080011.1	-	3329	621aa	MGP_CASTEiJ_P0080011	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0080015.1	-	1292	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0080013.1	-	2677	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0080010.1	-	1402	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0080014.1	-	999	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Protein summary