Transcript: MGP_CASTEiJ_T0039963.1

Description

protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]

Gene Synonyms

1500001L12Rik, A730003J17Rik, C530050I23Rik, C630029H24Rik, LOC382930

Location

Chromosome 14: 85,757,361-86,690,089 reverse strand.

Reference strain equivalent

Pcdh9

About this transcript

This transcript has 5 exons, is annotated with 66 domains and features and maps to 296 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0020869.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0039963.1	-	6521	1237aa	MGP_CASTEiJ_P0039963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36992, CCDS79350, CCDS79352	A0A0A6YVP5 A0A0A6YWM0 A0A0A6YWY8 A0A0A6YY09 A0A0A6YY37 F8VPK8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0039964.1	-	6127	1203aa	MGP_CASTEiJ_P0039964	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0039965.1	-	5164	1038aa	MGP_CASTEiJ_P0039965	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0039966.1	-	5094	1195aa	MGP_CASTEiJ_P0039966	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0039967.1	-	3714	1237aa	MGP_CASTEiJ_P0039967	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0039971.1	-	3011	873aa	MGP_CASTEiJ_P0039971	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0039968.1	-	354	84aa	MGP_CASTEiJ_P0039968	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0039970.1	-	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0039969.1	-	3323	1053aa	MGP_CASTEiJ_P0039969	Unknown likely coding		-	-

Transcript: MGP_CASTEiJ_T0039963.1

Protein summary

Protein domains for MGP_CASTEiJ_P0039963.

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Transcript: MGP_CASTEiJ_T0039963.1

Protein summary

Protein domains for MGP_CASTEiJ_P0039963.

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