Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Custom tracks

Transcript: MGP_CASTEiJ_T0034053.1

Description

syndecan 1 [Source:MGI Symbol;Acc:MGI:1349162]

Gene Synonyms

AA408134, AA409076, CD138, Sstn, Synd, Synd-1, Synd1, syn-1

Location

Reference strain equivalent

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features and maps to 118 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0034055.1	-	342	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0034054.1	-	855	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0034053.1	-	1354	311aa	MGP_CASTEiJ_P0034053	Unknown likely coding	CCDS25803	E0CYT6 P18828 Q3V1F2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Protein summary