Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Slco1c1 MGP_CAROLIEiJ_G0029026

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Description

solute carrier organic anion transporter family, member 1c1 [Source:MGI Symbol;Acc:MGI:1889679]

Location

Chromosome 6: 139,334,721-139,381,142 forward strand.

CAROLI_EIJ_v1.1:LT608245.1

About this gene

This gene has 6 transcripts (splice variants), 258 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0076679.1	Slco1c1-203	3176	715aa	MGP_CAROLIEiJ_P0076679	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0076681.1	Slco1c1-205	2768	544aa	MGP_CAROLIEiJ_P0076681	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0076680.1	Slco1c1-204	2515	666aa	MGP_CAROLIEiJ_P0076680	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0076678.1	Slco1c1-202	2680	469aa	MGP_CAROLIEiJ_P0076678	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0076677.1	Slco1c1-201	2427	46aa	MGP_CAROLIEiJ_P0076677	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0076682.1	Slco1c1-206	2277	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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