Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tnrc18 MGP_CAROLIEiJ_G0027966

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Location

Chromosome 5: 135,461,721-135,555,760 reverse strand.

CAROLI_EIJ_v1.1:LT608240.1

About this gene

This gene has 8 transcripts (splice variants), 193 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0071928.1	Tnrc18-201	9306	2674aa	MGP_CAROLIEiJ_P0071928	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0071932.1	Tnrc18-205	6488	1755aa	MGP_CAROLIEiJ_P0071932	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P7QV02	-
MGP_CAROLIEiJ_T0071935.1	Tnrc18-208	696	114aa	MGP_CAROLIEiJ_P0071935	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0071934.1	Tnrc18-207	706	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0071930.1	Tnrc18-203	600	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0071933.1	Tnrc18-206	829	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0071931.1	Tnrc18-204	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0071929.1	Tnrc18-202	9114	3037aa	MGP_CAROLIEiJ_P0071929	Unknown likely coding	-	-

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Summary

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