Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
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Gene: Brat1 MGP_CAROLIEiJ_G0027954

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Description

BRCA1 associated ATM activator 1 [Source:NCBI gene;Acc:110294302]

Location

Chromosome 5: 133,421,594-133,436,177 forward strand.

CAROLI_EIJ_v1.1:LT608240.1

About this gene

This gene has 5 transcripts (splice variants) and 202 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0071884.1	Brat1-205	3439	867aa	MGP_CAROLIEiJ_P0071884	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0071880.1	Brat1-201	3311	822aa	MGP_CAROLIEiJ_P0071880	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0071881.1	Brat1-202	3033	315aa	MGP_CAROLIEiJ_P0071881	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0071883.1	Brat1-204	3193	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0071882.1	Brat1-203	2191	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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